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王建平(兼职教授)

PostTime:2017-3-1 08:51 阅读人数:329

王建平2005年获得美囯密歇根州立大学植物遗传育种学专业博士学位,2005至2010年在美国伊利诺伊州大学香槟校区从事博士后研究。致力于甘蔗基因组、甘蔗的起源与演化,主要作物农艺性状的分子遗传机制等相关研究。 现为美国佛罗里达大学农学系遗传与基因组学研究方向助理教授及博士生导师。研究结果先后发表于 Science, Nature,PNAS,The Plant Journal,BMC Genomics 等刊物,过去6年发表论文36篇。

主要研究方向:

    1.通过对甘蔗全基因启动子序列及其对应基因表达分析来研究纤维素及蔗糖积累与转化的分子调控机制.

    2.通过对甘蔗核心种质资源的外显基因组序列分析来研究甘蔗生物量的主控基因及等位基因内/间互作效应并探索甘蔗的起源与演化。

    3.通过基因组定位与图位克隆来解析主要作物农艺性状的分子遗传机制。

联系方式:Wangjia4@gmail.com

专利:

Hudson M, Wang J.P., Diers B., and Kesung K.. 2011. A DNA Sequence that confers Aphid Resistance in Soybean. 国际专利号: WO 2011/097492 A1 from the International Bureau of WIPO。

代表文章 *同等贡献)

43.Qian Y. (&), X. Yang (g), Z. Peng (g), L. Xu, and J. Wang. Development and applications of a high throughput genotyping tool for polyploids: single nucleotide polymorphism (SNP) array. 2017. Frontiers in Plant Science. In press.

42.Wang L. (&). Rowland D., Yang X (g). E. van Santen, B. Tillman, J. Wang. Mild water deficit in the field downregulated drought responsive genes in peanut leaf tissues. 2017. International Journal of Agriculture and Biology, In press.

41.Peng Z. (g), L. Tan (p), Y. López (&), J. Maku (g), F. Liu (&), H. Zhou (p), Y. Tseng (g), X. Yang (g), Y. Hsieh (g), J. Song (p), L. Wang (&), B. L. Tillman, M. Gallo, and J. Wang. Morphological and genetic characterization of non-nodulating peanut recombinant inbred lines. Crop Science. 2018. 58, 1–11. DOI: 10.2135/cropsci2017.06.0235

40.Todd J. R., H. Sandhu, J. Binder, R. Arundale, V. S Gordon, J. Song (p), B. Glaz, J. Wang. Fiber composition of a diversity panel of the world collection of sugarcane (Saccharum spp.) and related grasses. 2018. Bragantia. DOI: 10.1590/1678-4499.2016525.

39.Feng, G., Huang, L., Li, J., Wang, J., Xu, L., Pan, L., Zhao, X., Wang, X., Huang, T., and Zhang, X. (2017). Comprehensive transcriptome analysis reveals distinct regulatory programs during vernalization and floral bud development of orchardgrass (Dactylis glomerata L.). BMC Plant Biology, 17(1). doi: 10.1186/s12870-017-1170-8

38.Pan, L., Yang, Z., Wang, J., Wang, P., Ma, X., Zhou, M., Li, J., Gang, N., Feng, G., Zhao, J., and Zhang, X. (2017). Comparative proteomic analyses reveal the proteome response to short-term drought in Italian ryegrass (Lolium multiflorum). PLoS ONE, 12(9). doi: 10.1371/journal.pone.0184289

37.Peng, Z., Fan, W., Wang, L., Paudel, D., Leventini, D., Tillman, B. L., and Wang, J. (2017). Target enrichment sequencing in cultivated peanut (Arachis hypogaea L.) using probes designed from transcript sequences. Molecular Genetics and Genomics. doi: 10.1007/s00438-017-1327-z

36.Peng, Z., Liu, F., Wang, L., Zhou, H., Paudel, D., Tan, L., Maku, J., Gallo, M., and Wang, J. (2017). Transcriptome profiles reveal gene regulation of peanut (Arachis hypogaea L.) nodulation. Scientific Reports, 7. doi: 10.1038/srep40066

35.Tian, W., Paudel, D., Vendrame, W., and Wang, J. (2017). Enriching Genomic Resources and Marker Development from Transcript Sequences of Jatropha curcas for Microgravity Studies. International Journal of Genomics, 2017. doi: 10.1155/2017/8614160

34.Todd, J., Sandhu, H., Hale, A., Glaz, B., and Wang, J. (2017). Phenotypic evaluation of a diversity panel selected from the world collection of sugarcane (Saccharum spp) and related grasses. Maydica, 62(2).

33.Varshney, R. K., Shi, C., Thudi, M., Mariac, C., Wallace, J., Qi, P., Zhang, H., Zhao, Y., Wang, X., Rathore, A., Srivastava, R. K., Chitikineni, A., Fan, G., Bajaj, P., Punnuri, S., Gupta, S. K., Wang, H., Jiang, Y., Couderc, M., Katta, M. A. V. S. K., Paudel, D. R., Mungra, K. D., Chen, W., Harris-Shultz, K. R., Garg, V., Desai, N., Doddamani, D., Kane, N. A., Conner, J. A., Ghatak, A., Chaturvedi, P., Subramaniam, S., Yadav, O. P., Berthouly-Salazar, C., Hamidou, F., Wang, J., Liang, X., Clotault, J., Upadhyaya, H. D., Cubry, P., Rhoné, B., Gueye, M. C., Sunkar, R., Dupuy, C., Sparvoli, F., Cheng, S., Mahala, R. S., Singh, B., Yadav, R. S., Lyons, E., Datta, S. K., Hash, C. T., Devos, K. M., Buckler, E., Bennetzen, J. L., Paterson, A. H., Ozias-Akins, P., Grando, S., Wang, J., Mohapatra, T., Weckwerth, W., Reif, J. C., Liu, X., Vigouroux, Y., and Xu, X. (2017). Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology, 35(10). doi: 10.1038/nbt.3943

32.Yang, X., Song, J., You, Q., Paudel, D. R., Zhang, J., and Wang, J. (2017). Mining sequence variations in representative polyploid sugarcane germplasm accessions. BMC Genomics, 18(594). doi: 10.1186/s12864-017-3980-3

31.Yang, X., Sood, S., Glynn, N., Islam, M. S., Comstock, J., and Wang, J. (2017). Constructing high-density genetic maps for polyploid sugarcane (Saccharum spp.) and identifying quantitative trait loci controlling brown rust resistance. Molecular Breeding, 37(10). doi: 10.1007/s11032-017-0716-7

30.Yao, W., Wang, S., Zhou, B., Wang, J., and Jiang, T. (2017). Characterization of ERF76 promoter cloned from Populus simonii × P. nigra. Acta Physiologiae Plantarum, 39(11), 249. doi: 10.1007/s11738-017-2539-x

29.Tseng Y., Barry L. Tillman, Z. Peng, J. Wang. 2016. Identifying major QTLs underlying spotted wilt resistance in peanut cultivar Florida-EPTM ‘113’. BMC Genetics. 17:128.

28.Hsieh Y., M. Jain, J. Wang, M. Gallo. 2016. Direct organogenesis from cotyledonary node explants suitable for Agrobacterium-mediated transformation in peanut (Arachis hypogaea L.). Plant Cell, Tissue, and Organ Culture. DOI: 10.1007/s11240-016-1095-1

27.Zhao X., L. Huang, X. Zhang, J. Wang, D. Yan, J. Li, L. Tang, X. Li, T. Shi. 2016. Construction of high-density genetic linkage map and identification of flowering-time QTLs in orchardgrass using SSRs and SLAF-seq. Scientific Reports. 6:29345.

26.Khera P., M. K Pandey, H.Wang, S. Feng, A. K Culbreath, S. Kale, J. Wang, C C. Holbrook, W. Zhuang, R. K Varshney, B. Guo. 2016. Mapping quantitative trait loci conferring resistance to Tomato spotted wilt virus and leaf spots in a recombinant inbred line population of peanut (Arachis hypogaea L.) from SunOleic 97R and NC94022. Plos One. 11(7):e0158452.

25.Zhang J., A. Sharma, Q. Yu, J. Wang, L. Li, L. Zhu, X. Zhang, Y. Chen, R. Ming. 2016.  Comparative structure analysis of Bru1 Region homologs in in Saccharum spontaneum and Saccharum officinurum. BMC Genomics. 17:446.  

24.Song J., X. Yang, M. F. R. Resende Jr., L. G. Neves, J. Todd, J. Zhang, J. C. Comstock, J. Wang. 2016. Natural allelic variations in highly polyploid Saccharum complex. Frontiers in Plant Sciences. 7:804.

23.Pan L., X. Zhang, J. Wang, X. Ma, M. Zhou, L. Huang, G. Nie, P. Wang, Z. Yang, J. Li. 2016. Transcriptional profiles of drought-related genes in modulating metabolic processes and antioxidant defenses in Lolium multiflorum. Frontiers in Plant Sciences. 7:519.  

22.Yang X., J. Wang. 2016. Genome-wide analysis of NBS-LRR genes in sorghum genome revealed several events contributing to NBS-LRR gene evolution in grass species. Evolutionary Bioinformatics. 12:9-21.

21.Peng Z., M. Gallo, B. Tillman, D. Rowland, J. Wang. 2015. Molecular marker development from transcript sequences and germplasm evaluation for cultivated peanut (Arachis hypogaea L.). Molecular Genetics and Genomics. 291(1): 363-381.

20.Huang L, H. Yan, X. Zhao, X. Zhang, J. Wang, T. Frazier, G. Yin, N. Burgos; X. Huang, D. Yan, W. Zang. 2015. Identifying differentially expressed genes under heat stress and developing molecular markers in orchardgrass (Dactylis glomerata L.) through transcriptome analysis. Molecular Ecology Resources. 15:1497-1509.

19.VanBuren B*., F. Zeng*, C. Chen*, J. Zhang*, C. M.Wai, J. Han, R.Aryal, A.R. Gschwend, J. Wang, J. Na, L. Huang, L.Zhang, W. Miao, J. Gou, J. Arro, R. Guyot, R. C. Moore, M. Wang, F. Zee, P. H. Moore, Q.Yu, R. Ming. 2015. Origin and domestication of papaya Yh chromosome. Genome Research. 25:1–10. 

18.Pandey M. K., M.Wang, L. Qiao, S. Feng, P. Khera, H. Wang, B. Tonnis, N. Barkley, J. Wang, C. Holbrook, A. Culbreath, R. K. Varshney, B. Guo. 2014. Identification of QTLs associated with peanut oil contents in RIL populations and mapping FAD2 genes and their relative contribution towards oil quality. BMC Genetics. 15:133.

17.Nayak S.N., J. Song, A.Villa, B. Pathak, T. Ayala-Silva, X. Yang , J. Todd, N. C. Glynn, D. N. Kuhn, B. Glaz, R.Gilbert, J.C. Comstock, J. Wang. 2014. Promoting utilization of Saccharum spp. genetic resources though genetic diversity analysis and core collection construction. Plos One. 9 (10): e 10856.

16.Nie G, X. Zhang, L.Huang, W. Xu, J. Wang, Y. Zhang , X. Ma, Y. Yan , H. Yan. 2014. Genetic Variability and Population Structure of Potential Bioenergy Crop Miscanthus sinensis (Poaceae) in Southwest China Based on SRAP Markers. Molecules. 19: 12881-12897.

15.Guan X., M. Hirata, C. Ding, N. Xu, N. Yuyama, L. Tan, Y. Fu, J. Wang and H. Cai. 2014. A genetic linkage map constructed from a BC1 population derived from an interspecific hybridization, Lolium multiflorum x Lolium temulentum population. Grassland Science. DOI: 10.1111/grs.12055.

14.Todd J., J. Wang, B. Glaz, S. Sood, T. Ayala-Silva, S. Nayak, N. Glynn, O.A. Gutierrez, D. Kuhn, M. Tahir and J. Comstock. 2014. Characterization and Core Selection from the Miami World Collection of Sugarcane and related grasses using phenotypic traits. Genetic Resources and Crop Evolution. 61(6):1581-1596.

13.Na J. K*, J. Wang *, R. Ming. 2014. Accumulation of interspersed and sex-specific repeats in the non-recombining region of papaya sex chromosomes. BMC Genomics. 15:335.

12.Wang J., S. Nayak, K. Koch, and R. Ming. 2013. Carbon partitioning in sugarcane (Saccharum species). Frontiers in Plant Science. 4:201.

11.Xu W., Zhang X., Huang L., Nie G., J. Wang. 2013. Higher genetic diversity and gene flow in wild populations of Miscanthus sinensis in southwest China. Biochemical Systematics and Ecology. 48:174-181.

10. Cook*, D.E., Lee*, T.G., Guo*, X., Melito, S., Wang, K., Bayless, A., Wang, J., Hughes, T.J., Willis, D.K., Clemente, T., Diers, B.W., Hudson, M.E. and Bent, A.F. 2012. Copy Number Variation of Multiple Genes at Rhg1 Mediates Nematode Resistance in Soybean. Science. 338(6111): 1206-1209. DOI:10.1126/science.1228746. 

9. Wang J. *, J. Na*, Q.Yu*, A. R. Gschwend*, J. Han, F. Zeng, R. Aryal, R. VanBuren, J. E. Murray, W. Zhang, R. N. Pérez, F. A.Feltus, C. Lemke, E. J. Tong, C. Chen, C. M. Wai, R. Singh, M, Wang, X. Min, M. Alam, D. Charlesworth, P. H. Moore, J. Jiang, A. H. Paterson, R. Ming. 2012. Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution. PNAS. 109 (34):13710-13715. www.pnas.org/cgi/doi/10.1073/pnas.1207833109.

8. Na J. *, J. Wang*, J. E. Murray, A.R. Gschwend, W. Zhang, Q. Yu, R. N. Pérez, F. A. Feltus, C. Chen, Z. Kubat, P. H. Moore, J. Jiang, A. H. Paterson, R. Ming. 2012. Construction of physical maps for the sex-specific regions of papaya sex chromosomes. BMC Genomics. BMC Genomics 13:176 doi:10.1186/1471-2164-13-176. *: equal contributors.

7. Wang J.P., B. Roe, S. Macmil, Q. Yu, J. E. Murray, H. Tang, C. Chen, F. Najar, G. Wiley, J. Bowers, M. V. Sluys, D.S. Rokhsar, M. E. Hudson, S. P. Moose, A. H. Paterson, R.Ming. 2010. Microcollinearity between diploid sorghum and autopolyploid sugarcane genomes. BMC Genomics. 11: 261

6. Wu X, J. Wang, J.K. Na, Q. Yu, F. Zee, S. Huber, R. Ming. 2010. The origin of the non-recombining region of sex chromosomes in Carica and Vasconcellea. Plant Journal. 63:801-810.

5. Wang J.P. S. Bughrara, M. R. Mian, M.C. Saha, D. A. Sleper. 2009. Parental genome composition and genetics classifications of derivatives from intergeneric crosses of Festuca mairei and Lolium perenne. Mol. Breeding. 23: 299-309.

4. Wang J.P., C. Chen, J.K. Na, Q. Yu, S. Hou, R. Paull, P. Moore, M. Alam and R. Ming. 2008. Genome-wide comparative analyses of microsatellites in papayagenome. Tropical Plant Biology. 1:278-292.

3. Ming, R., …J. Wang. (41st of 85),…L. Wang, M., Alam. 2008. Genome of the transgenic tropical fruit tree papaya (Carica papaya L.). Nature. 452: 991-996.

2. Ming R., J. Wang, Moor P.H., and A.H. Paterson. 2007. Sex determination in flowering plants. Amer. J. Bot. 94:141-150.

1.Wang J.P. and S. Bughrara. 2007. Monitoring of gene expression profiles and identification of candidate genes involved in drought tolerance in Festuca mairei. Mol. Genet. Genomics. 277 (5): 571-587.

 

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